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<title>AgnosticWeb.com - Bacteria break down lignin with enzymes</title>
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<title>Bacteria break down lignin with enzymes</title>
<content:encoded><![CDATA[<p>Again the use of naturally produced enzymes to break down living material:-http://www.sciencedaily.com/releases/2016/01/160106143032.htm-&amp;quot;The original goal was to design a single new enzyme that could do the job of several found in nature. But that turned out to be an impossible task, in part because lignin molecules are irregular. They&amp;apos;re made of hundreds of components that twist either to the left or the right, but the pattern of twists doesn&amp;apos;t repeat, and an enzyme that&amp;apos;s tailored to break a left-handed bond won&amp;apos;t cleave a right-handed one.-&amp;quot;&amp;apos;Making a single enzyme would be like trying to make a glove that&amp;apos;s designed for your left hand fit on your right hand,&amp;quot; said Kate Helmich, co-lead author of the study and a recent Ph.D. graduate of UW-Madison&amp;apos;s Biochemistry Department. &amp;quot;Our two hands are different configurations of the same fingers, and lignin is like a chain of many different hands. Degrading that entire chain would require an enzyme, or glove, that can attach to both the left and the right hands within it.&amp;quot;-&amp;quot;The researchers found that Sphingobium bacteria use two enzymes, known as LigE and LigF, to attack lignin as a team.-&amp;quot;&amp;apos;The key finding is that we now understand how the left-hand and the right-hand versions are broken,&amp;quot; Phillips said. &amp;quot;It&amp;apos;s not through a single super enzyme but through teamwork where you&amp;apos;ve got one for the left and one for right.-&amp;quot;It wasn&amp;apos;t clear how the bacteria did it until Donohue and his team made both the left-handed and right-handed compounds, and then assayed them with purified enzymes. Those experiments proved that one works on left and one works on right.&amp;quot;-Comment: Biomimetics at work. How did the bacteria find or invent these enzymes to use? Chance or design?</p>
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<link>https://agnosticweb.com/index.php?id=20798</link>
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<pubDate>Thu, 07 Jan 2016 15:45:26 +0000</pubDate>
<category>Introduction</category><dc:creator>David Turell</dc:creator>
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